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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159405046_159405928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159405046 - 159405928

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCC

5'SS Class:

strong_major

3'SS Sequence:

TCATGTTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCATGTTCAATA

Flanking Amino Acid:

PGSPAVYKLKEQLLDCKGED

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

34.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

66.6

0.37

0.9

62.5

38.4

Minor 5ss

33.3

-1.9

3.2

44.6

43.4

Minor BPS

48.6

-0.1

1.9

59.77

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038098

159400715 - 159447085

46371