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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159417797_159419976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159417797 - 159419976

Intron Length:

2180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATGCTAATGT

Flanking Amino Acid:

FHCNRVIEGDVVSALNKAWC

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

72.7

0.51

0.8

65.1

36.3

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

41.8

-0.5

2.4

61.53

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017473

159416776 - 159470015

53240

ENSAPLT00000040506

159416776 - 159454057

37282

ENSAPLT00000017232

159417278 - 159479105

61828

ENSAPLT00000039024

159416776 - 159468273

51498

ENSAPLT00000009730

159417278 - 159434820

17543

ENSAPLT00000038098

159400715 - 159447085

46371

ENSAPLT00000033263

159417278 - 159469451

52174

ENSAPLT00000044909

159416776 - 159470542

53767