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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159421360_159422125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159421360 - 159422125

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTTTCTTCATA

Flanking Amino Acid:

NAMGKQWHVEHFVCAKCEKP

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

0.72

78.4

31.2

Major PPT

81.4

0.71

0.7

77.1

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

65.9

0.5

1.7

76.94

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033263

159417278 - 159469451

52174

ENSAPLT00000044909

159416776 - 159470542

53767

ENSAPLT00000017473

159416776 - 159470015

53240

ENSAPLT00000040506

159416776 - 159454057

37282

ENSAPLT00000017232

159417278 - 159479105

61828

ENSAPLT00000039024

159416776 - 159468273

51498

ENSAPLT00000009730

159417278 - 159434820

17543

ENSAPLT00000038098

159400715 - 159447085

46371