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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159491956_159492905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159491956 - 159492905

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

AAGTATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCATCAGTAAGT

Flanking Amino Acid:

FQLKSEPSTRGPAVSNPATK

Intron Amino Acid Position:

1456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.7

0.49

66.9

43.8

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

46.4

-0.1

2.4

69.67

46.8

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374

ENSAPLT00000025348

159488614 - 159520960

32347