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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159493124_159494342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159493124 - 159494342

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGGTCT

5'SS Class:

major

3'SS Sequence:

ATGCTGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTTCCTCACAT

Flanking Amino Acid:

TVAKEAELREKLCTIQSENM

Intron Amino Acid Position:

1383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

66.8

39.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

72.5

0.51

69.2

41.2

Minor 5ss

39.7

-1.2

3.6

56.1

42.7

Minor BPS

56.5

0.28

78.72

42.9

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374

ENSAPLT00000025348

159488614 - 159520960

32347