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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159496263_159497877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159496263 - 159497877

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTCA

5'SS Class:

major

3'SS Sequence:

TCTTCTGTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TTACTAAGAACT

Flanking Amino Acid:

TLQEECRAAQAEQESVTSEF

Intron Amino Acid Position:

1284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.3

38.7

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

76.4

0.59

0.8

71.9

32.7

Minor 5ss

-1.6

3.4

48.5

47.2

Minor BPS

46.3

-0.2

1.9

69.84

39.9

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025348

159488614 - 159520960

32347

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374