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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159498016_159498668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159498016 - 159498668

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GAGTTTTCAACT

Flanking Amino Acid:

ASQQQVESFKIQVSVLTSEK

Intron Amino Acid Position:

1238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.9

74.7

41.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.7

0.76

0.8

80.6

31.4

Minor 5ss

23.3

-3.1

3.9

38.3

46.6

Minor BPS

57.8

0.32

1.5

69.68

41.3

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374

ENSAPLT00000025348

159488614 - 159520960

32347