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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159498969_159499508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159498969 - 159499508

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

GTTTTCTGCACT

Flanking Amino Acid:

QKQETLQEEIKSLQSSMQQD

Intron Amino Acid Position:

1178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

63.3

0.33

1.5

41.2

Major PPT

72.9

0.52

0.9

67.5

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

59.4

0.38

1.9

81.31

40.1

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025348

159488614 - 159520960

32347

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374