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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159499672_159500271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159499672 - 159500271

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

ATGTAACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTATGTAACT

Flanking Amino Acid:

TIQELELAKKDAQKSTLMDM

Intron Amino Acid Position:

1124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

71.5

0.48

63.5

42.2

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

56.2

0.27

2.2

80.44

41.7

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025348

159488614 - 159520960

32347

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374