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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159500377_159500764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159500377 - 159500764

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTAAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AAGTATTTAAAT

Flanking Amino Acid:

ERLLKEQKIKEHSGALRELE

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

76.5

0.6

Minor 5ss

35.6

-1.6

3.2

48.3

47.2

Minor BPS

57.1

0.3

1.6

70.04

40.4

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374

ENSAPLT00000025348

159488614 - 159520960

32347

ENSAPLT00000022380

159485688 - 159512987

27300