Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_159502387_159503660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159502387 - 159503660

Intron Length:

1274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTCTGA

5'SS Class:

major

3'SS Sequence:

TGTTTGTGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TATTGTAGAAAC

Flanking Amino Acid:

KKELDASRKENLLMEYDKQG

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.9

42.7

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

67.3

0.39

1.2

71.5

43.2

Minor 5ss

42.2

-0.9

3.1

56.9

47.2

Minor BPS

43.7

-0.5

2.1

58.87

39.5

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009497

159488614 - 159512987

24374