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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159511237_159512981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159511237 - 159512981

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TATTTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

TTACCTCTATTT

Flanking Amino Acid:

MEVQDGGQEMVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

81.6

0.71

0.9

77.5

36.5

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

48.8

-0

1.9

40.1

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022380

159485688 - 159512987

27300

ENSAPLT00000021207

159487795 - 159512987

25193

ENSAPLT00000009497

159488614 - 159512987

24374