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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159518358_159520489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

159518358 - 159520489

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAGG

5'SS Class:

major

3'SS Sequence:

CTCTCTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTATAT

U12 Branch Point Sequence:

TATTGGCTAAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

61.5

0.29

1.3

45.5

Major PPT

77.4

0.62

0.7

76.7

25.3

Minor 5ss

30.7

-2.2

3.3

40.3

45.4

Minor BPS

42.1

-0.5

2.7

69.55

46.9

Associated Gene:

Gene:

GCC2

Ensembl Gene ID:

ENSAPLG00000009100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025348

159488614 - 159520960

32347