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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159631632_159632340_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
159631632 - 159632340

Intron Length:
709

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGATTA

5'SS Class:
major

3'SS Sequence:
AATTTCTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATTAC

U12 Branch Point Sequence:
TTACCATAAAAA

Flanking Amino Acid:
NIYQLSFRQNASDREIVWVM

Intron Amino Acid Position:
372

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.3
73.8
33

Major BPS
66
0.4
1.1
57.8
38.6

Major PPT
83.8
0.76
0.8
77.8
35.5

Minor 5ss
37.5
-1.4
3.2
46.5
42.5

Minor BPS
48.3
-0.1
2
64.76
40.7

Associated Gene:

Gene:
SLC5A7

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

159630879 - 159653756
22878

159631008 - 159650910
19903