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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159633843_159635732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159633843 - 159635732

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

CCCTCAATAACA

Flanking Amino Acid:

YTWLDNFLLLTLGGIPWQAY

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

88.7

0.87

0.7

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

49.6

-0

1.9

61.12

44.7

Associated Gene:

Gene:

SLC5A7

Ensembl Gene ID:

ENSAPLG00000008721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019505

159631008 - 159650910

19903

ENSAPLT00000009077

159630879 - 159653756

22878