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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159635877_159640755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159635877 - 159640755

Intron Length:

4879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGGTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TAGAATTGAACA

Flanking Amino Acid:

VQLFCIFLGLWISVPFAMSH

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

81.8

0.72

0.9

75.5

38.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.1

-0

1.6

59.48

39.8

Associated Gene:

Gene:

SLC5A7

Ensembl Gene ID:

ENSAPLG00000008721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019505

159631008 - 159650910

19903

ENSAPLT00000009077

159630879 - 159653756

22878