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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159739802_159743428_F

Intron Information:

Intron Rank:

138169

Intron Class:

major

Intron Phase:

Intron Coordinates:

159739802 - 159743428

Intron Length:

3627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAACTTC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTATTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

68.2

37.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.6

0.82

0.6

85.4

Minor 5ss

47.9

-0.2

2.9

64.2

42.8

Minor BPS

60.4

0.41

1.4

72.92

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024669

159734382 - 159743598

9217