Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_159776478_159776585_F

Intron Information:

Intron Rank:

141281

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

159776478 - 159776585

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

AAATTATACTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

51.9

0.04

1.2

54.7

43.4

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

65.4

0.56

1.9

88.15

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022804

159775655 - 159781599

5945