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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159776671_159782809_F

Intron Information:

Intron Rank:

141275

Intron Class:

major

Intron Phase:

Intron Coordinates:

159776671 - 159782809

Intron Length:

6139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATTCTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

83.4

27.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.4

0.75

0.7

32.5

Minor 5ss

33.8

-1.9

2.9

41.4

44.7

Minor BPS

72.8

0.58

1.3

69.25

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019930

159775655 - 159783255

7601