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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159809928_159810839_F

Intron Information:

Intron Rank:

140509

Intron Class:

major

Intron Phase:

Intron Coordinates:

159809928 - 159810839

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

GATGATGTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

81.6

0.71

0.9

76.2

37.8

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

43.4

-0.4

2.2

61.24

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034901

159794640 - 159810974

16335