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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160026739_160030912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160026739 - 160030912

Intron Length:

4174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATGCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTAATATAAATT

Flanking Amino Acid:

ILNSSLGDEIDSHDAVLRFN

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.2

0.64

0.9

69.6

41.5

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

48.7

-0

1.9

70.3

40.7

Associated Gene:

Gene:

ST6GAL2

Ensembl Gene ID:

ENSAPLG00000008393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029009

159873327 - 160048508

175182

ENSAPLT00000008719

159967587 - 160048540

80954