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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160126226_160161418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

160126226 - 160161418

Intron Length:

35193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAACATC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTGTCTTTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

69.5

41.5

Major BPS

0.6

65.6

41.1

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

42.9

-0.8

52.3

44.8

Minor BPS

70.5

0.64

1.6

78.71

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023627

160045854 - 160161529

115676