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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160243719_160252011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

160243719 - 160252011

Intron Length:

8293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.95

0.7

84.8

35.4

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013957

160243492 - 160296238

52747