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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160252040_160254663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160252040 - 160254663

Intron Length:

2624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

TTCTTGTTAACA

Flanking Amino Acid:

MRSLQENGDQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

80.3

0.68

0.9

76.6

36.3

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

65.5

0.48

2.1

78.35

38.8

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747