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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160256799_160260245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160256799 - 160260245

Intron Length:

3447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTGCTTTGAAT

Flanking Amino Acid:

LREKIRDLEKSFTQKYPPVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

74.6

0.61

1.4

34.5

Major PPT

89.2

0.88

0.7

88.9

28.2

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

0.62

1.5

83.91

37.2

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747