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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160260307_160264954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160260307 - 160264954

Intron Length:

4648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTAACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATACCAACT

Flanking Amino Acid:

LSEKDRKRILITGGAGFVGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

68.3

0.41

62.9

37.3

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

47.1

-0.1

2.1

75.14

40.9

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747