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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160265136_160271434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160265136 - 160271434

Intron Length:

6299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GGAAAAATAATA

Flanking Amino Acid:

HDVVEPLYIEVDQIYHLASP

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.5

0.78

0.6

80.9

24.3

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

40.5

-0.7

1.8

46.67

35.3

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747