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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160271540_160272946_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

160271540 - 160272946

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCAAAATCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTCCCAAAATC

Flanking Amino Acid:

TNTIGTLNMLGLAKRVGARL

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

73.9

0.59

30.2

Major PPT

57.9

0.18

48.4

38.3

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

55.1

0.14

1.9

72.87

38.1

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747