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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160289204_160290406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160289204 - 160290406

Intron Length:

1203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGAAAT

U12 Branch Point Sequence:

ATTGCCTCAATC

Flanking Amino Acid:

GTQTRAFQYVSDLVNGLVAL

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

0.05

1.3

44.6

Major PPT

83.2

0.75

0.7

79.1

26.6

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

64.3

0.43

1.6

73.03

38.2

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747