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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160291956_160293993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160291956 - 160293993

Intron Length:

2038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TCTTGTTTGATA

Flanking Amino Acid:

EFAQLIKKLVGSESEIQFLS

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

74.7

0.56

72.1

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

58.3

0.25

1.8

69.19

38.1

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747