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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160294098_160296106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160294098 - 160296106

Intron Length:

2009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATTCTCTCATTT

Flanking Amino Acid:

AKLLLGWEPVVPLEEGLNKA

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

0.75

78.6

Major PPT

69.4

0.44

1.1

65.6

44.4

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

50.3

0.09

1.8

71.81

39.3

Associated Gene:

Gene:

UXS1

Ensembl Gene ID:

ENSAPLG00000013373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036907

160240305 - 160296877

56573

ENSAPLT00000013957

160243492 - 160296238

52747