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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160360869_160368206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160360869 - 160368206

Intron Length:

7338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAATT

Flanking Amino Acid:

DFLVRDSESSPSDFSVSLKA

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.2

34.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

80.9

0.69

0.8

77.5

29.8

Minor 5ss

35.8

-1.6

3.3

51.5

44.9

Minor BPS

73.1

0.8

1.3

88.05

30.7

Associated Gene:

Gene:

NCK2

Ensembl Gene ID:

ENSAPLG00000013494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020558

160360674 - 160411584

50911

ENSAPLT00000014061

160360215 - 160411584

51370