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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160368929_160388505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160368929 - 160388505

Intron Length:

19577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TTTTCTTTAACA

Flanking Amino Acid:

SLVKNLKDTLGLGKTKRKTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

87.5

0.84

0.8

84.9

28.4

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

92.1

1.32

0.7

95.26

19.9

Associated Gene:

Gene:

NCK2

Ensembl Gene ID:

ENSAPLG00000013494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020558

160360674 - 160411584

50911

ENSAPLT00000014061

160360215 - 160411584

51370