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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160539837_160553026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

160539837 - 160553026

Intron Length:

13190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGGAA

U12 Branch Point Sequence:

CTGGCTGTACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

45.3

-0.2

1.4

41.1

39.7

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

41.3

-0.8

2.3

45.68

47.5

Associated Gene:

Gene:

FHL2

Ensembl Gene ID:

ENSAPLG00000013513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034232

160539515 - 160577612

38098

ENSAPLT00000044040

160539515 - 160566739

27225