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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160539837_160564484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

160539837 - 160564484

Intron Length:

24648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

AGTCTGATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

71.8

0.49

1.1

68.5

42.1

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

42.9

-0.4

2.2

62.89

40.5

Associated Gene:

Gene:

FHL2

Ensembl Gene ID:

ENSAPLG00000013513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017820

160539515 - 160577612

38098