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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160581616_160584731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160581616 - 160584731

Intron Length:

3116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGTACG

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

ATATATCTAAGA

Flanking Amino Acid:

SVPKEDSDLPNDLKPTEAKK

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

66.8

44.4

Major BPS

62.6

0.31

59.1

37.6

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

35.5

-1.7

2.9

43.2

Minor BPS

46.2

-0.2

60.39

39.2

Associated Gene:

Gene:

C2orf49

Ensembl Gene ID:

ENSAPLG00000013546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014111

160581559 - 160592129

10571