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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160595795_160600841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160595795 - 160600841

Intron Length:

5047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

CAACCCTCAAGC

Flanking Amino Acid:

EFLLAGPGGLGMFATVDGIS

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

0.92

0.6

88.3

21.5

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

47.8

-0.1

1.9

54.48

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012232

160593062 - 160615083

22022