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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160608580_160614737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160608580 - 160614737

Intron Length:

6158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTG

5'SS Class:

strong_major

3'SS Sequence:

ACTGTAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTTGCTTCATC

Flanking Amino Acid:

LQFLEAKELFRSGQLDVREL

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

78.1

36.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

71.3

0.48

63.4

41.4

Minor 5ss

36.4

-1.5

3.3

49.3

46.9

Minor BPS

60.2

0.3

2.2

77.77

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012232

160593062 - 160615083

22022