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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160621096_160622216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160621096 - 160622216

Intron Length:

1121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCATTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCATTTAACA

Flanking Amino Acid:

SDLYRVHFILDKVRGTDLHM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

40.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.2

0.61

0.9

72.9

35.9

Minor 5ss

31.8

-2.1

3.1

34.5

41.3

Minor BPS

66.3

0.51

1.5

73.69

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022710

160620313 - 160623804

3492