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Intron Name: Anas_platyrhynchos_platyrhynchos_1_160622651_160623615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160622651 - 160623615

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TCTTGCTAGATT

Flanking Amino Acid:

AENLIYKYEKVKQKGTPILL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

0.11

2.1

74.24

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022710

160620313 - 160623804

3492