Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_160650628_160651937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160650628 - 160651937

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

ATAACAGTAAAC

Flanking Amino Acid:

TEKEVESMRQAGLLTVDPRV

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

80.8

33.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

77.8

0.63

0.9

72.9

37.4

Minor 5ss

35.7

-1.6

3.3

48.3

47.4

Minor BPS

43.9

-0.4

2.2

57.49

40.2

Associated Gene:

Gene:

MRPS9

Ensembl Gene ID:

ENSAPLG00000013899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043163

160650411 - 160681782

31372

ENSAPLT00000014505

160650411 - 160681782

31372