Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_160653378_160655076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160653378 - 160655076

Intron Length:

1699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TAACTCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTGCTTTTAACT

Flanking Amino Acid:

EQGVAFSTGEGGRKTSRATV

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

66.2

0.37

1.1

68.7

36.9

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

74.6

0.85

1.2

84.67

Associated Gene:

Gene:

MRPS9

Ensembl Gene ID:

ENSAPLG00000013899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043163

160650411 - 160681782

31372

ENSAPLT00000014505

160650411 - 160681782

31372