Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_160655246_160657852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160655246 - 160657852

Intron Length:

2607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CATCCTTTAATG

Flanking Amino Acid:

MLLEKLSDDDYSRFIQLLQK

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.5

0.73

0.9

76.6

37.7

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

64.1

0.31

1.4

61.67

40.7

Associated Gene:

Gene:

MRPS9

Ensembl Gene ID:

ENSAPLG00000013899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043163

160650411 - 160681782

31372

ENSAPLT00000014505

160650411 - 160681782

31372