Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_160666531_160668835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160666531 - 160668835

Intron Length:

2305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TGCTTTTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TCTTGTCTAATC

Flanking Amino Acid:

HPTEIFPEQRKIQWGEDGRP

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.5

37.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

0.54

0.9

74.7

Minor 5ss

36.6

-1.5

3.3

47.2

42.3

Minor BPS

49.9

-0

2.1

66.2

40.3

Associated Gene:

Gene:

MRPS9

Ensembl Gene ID:

ENSAPLG00000013899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043163

160650411 - 160681782

31372

ENSAPLT00000014505

160650411 - 160681782

31372