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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16129457_16130279_F

Intron Information:

Intron Rank:

127336

Intron Class:

major

Intron Phase:

Intron Coordinates:

16129457 - 16130279

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAGTCT

5'SS Class:

major

3'SS Sequence:

TTTACTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATAACTTGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

68.2

37.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

82.5

0.73

0.9

76.9

37.1

Minor 5ss

38.9

-1.3

3.4

53.4

45.7

Minor BPS

61.3

0.35

1.4

68.75

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042123

16128920 - 16130843

1924