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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1616753_1617222_F

Intron Information:

Intron Rank:

139742

Intron Class:

major

Intron Phase:

Intron Coordinates:

1616753 - 1617222

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.1

0.56

0.9

64.9

41.3

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

56.8

0.19

1.6

68.82

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037840

1616579 - 1618444

1866