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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161706231_161714966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161706231 - 161714966

Intron Length:

8736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAA

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

HNSTSYDSAVIYRGFWTVLM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

60.6

0.26

1.1

67.5

35.1

Major PPT

83.7

0.76

0.7

76.2

32.4

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

TMEM182

Ensembl Gene ID:

ENSAPLG00000028840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046398

161695536 - 161717152

21617