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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1617318_1618182_F

Intron Information:

Intron Rank:

139743

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1617318 - 1618182

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CGAAAAATGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

CTCTCTGCAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

48.9

-0

1.1

36.7

43.6

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

46.1

-0.4

2.2

54.65

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037840

1616579 - 1618444

1866