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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161767809_161773183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161767809 - 161773183

Intron Length:

5375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TTTTTCTCATAG

Flanking Amino Acid:

ESLLNDAITVVLYNLFKSFC

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

64.9

0.37

37.5

Major PPT

83.9

0.76

0.7

80.2

25.4

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

50.1

-0.1

64.63

43.1

Associated Gene:

Gene:

SLC9A2

Ensembl Gene ID:

ENSAPLG00000005438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005630

161747983 - 161780407

32425