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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16177792_16178338_R

Intron Information:

Intron Rank:

133508

Intron Class:

major

Intron Phase:

Intron Coordinates:

16177792 - 16178338

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

ATTTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TGAGCCATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

73.8

0.59

1.3

72.8

Major PPT

75.1

0.56

1.1

75.7

37.8

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

58.9

0.36

1.7

74.76

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028818

16176221 - 16178528

2308